Genome Meta Information: Actinomyces oris F0384 (GCA_000223355.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000223355.2 | ||
| HOMD Taxon-ID | HMT-893 | ||
| Species Name (in use by HOMD) | Actinomyces oris | ||
| Organism Name (as deposited) | HMT-893 Actinomyces oris clade-893 F0384 | ||
| Strain or Isolate | F0384 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces oris |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 22.6x | ||
| Contigs |
|
||
| Total Sequence Length | 3,133,330 (bp) | ||
| GC Percentage | 68.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/355/GCA_000223355.2_ASM22335v1 | ||
| CDS | 2556 | ||
| Genes | 2633 | ||
| mRNA | 2633 | ||
| misc RNA | 15 | ||
| rRNA | 9 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22335v1 |
| GenBank Assembly Accession | GCA_000223355.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000223355.1 [NCBI] |
| BioSample | SAMN00195309 [NCBI] |
| BioProject | PRJNA61829 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-01-21T14:35:04.723 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFUR01 |
| NCBI TaxID | 944560 |
| Isolation Source | |
| Geo Location | not determined |
