Genome Meta Information: Neisseria weaveri LMG 5135 (GCA_000224255.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000224255.2 | ||
| HOMD Taxon-ID | HMT-0092 | ||
| Species Name (in use by HOMD) | Neisseria weaveri | ||
| Organism Name (as deposited) | HMT-092 Neisseria weaveri LMG 5135 | ||
| Strain or Isolate | LMG 5135 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria weaveri |
||
| Sequencing Technology | Illumina GA IIx | ||
| Genome Coverage | 1000 | ||
| Contigs |
|
||
| Total Sequence Length | 2,183,368 (bp) | ||
| GC Percentage | 49.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/255/GCA_000224255.2_ASM22425v1 | ||
| CDS | 2002 | ||
| Genes | 2067 | ||
| mRNA | 2067 | ||
| misc RNA | 13 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.45 % | ||
| CheckM Contamination | 0.96 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM22425v1 |
| GenBank Assembly Accession | GCA_000224255.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000224255.1 [NCBI] |
| BioSample | SAMN02470907 [NCBI] |
| BioProject | PRJNA68581 [NCBI] |
| Submitter | Seoul National University |
| Submission Date | 2013-12-19T13:25:24.046 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFWQ01 |
| NCBI TaxID | 1051985 |
| Isolation Source | |
| Geo Location | |
