Genome Meta Information: Alloprevotella rava F0323 (GCA_000234115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000234115.1 | ||
| HOMD Taxon-ID | HMT-302 | ||
| Species Name (in use by HOMD) | Alloprevotella rava | ||
| Organism Name (as deposited) | HMT-302 Alloprevotella rava F0323 | ||
| Strain or Isolate | F0323 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella rava |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 40.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,593,873 (bp) | ||
| GC Percentage | 45.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/115/GCA_000234115.1_Prevotella_sp_F0323_V1 | ||
| CDS | 2125 | ||
| Genes | 2194 | ||
| mRNA | 2194 | ||
| misc RNA | 5 | ||
| rRNA | 9 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.69 % | ||
| CheckM Completeness | 99.16 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.47 % | ||
| CheckM2 Contamination | 0.05 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prevotella_sp_F0323_V1 |
| GenBank Assembly Accession | GCA_000234115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000234115.1 [NCBI] |
| BioSample | SAMN02463812 [NCBI] |
| BioProject | PRJNA40691 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:42.390 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACZK01 |
| NCBI TaxID | 679199 |
| Isolation Source | oral cavity |
| Geo Location | not determined |
