Genome Meta Information: Selenomonas noxia F0398 (GCA_000234135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000234135.1 | ||
| HOMD Taxon-ID | HMT-0130 | ||
| Species Name (in use by HOMD) | Selenomonas noxia | ||
| Organism Name (as deposited) | HMT-130 Selenomonas noxia F0398 | ||
| Strain or Isolate | F0398 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda; s__Centipeda noxia |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 63 | ||
| Contigs |
|
||
| Total Sequence Length | 2,113,402 (bp) | ||
| GC Percentage | 55.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/135/GCA_000234135.1_Sele_noxi_F0398_V1 | ||
| CDS | 1976 | ||
| Genes | 2058 | ||
| mRNA | 2058 | ||
| misc RNA | 18 | ||
| rRNA | 6 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.35 % | ||
| CheckM Completeness | 99.09 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Sele_noxi_F0398_V1 |
| GenBank Assembly Accession | GCA_000234135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000234135.1 [NCBI] |
| BioSample | SAMN02463846 [NCBI] |
| BioProject | PRJNA43115 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:45.950 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADGH01 |
| NCBI TaxID | 702437 |
| Isolation Source | missing |
| Geo Location | not determined |
