Genome Meta Information: Fusobacterium sp. HMT-370 F0437 (GCA_000235465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000235465.1 | ||
| HOMD Taxon-ID | HMT-0370 | ||
| Species Name (in use by HOMD) | Fusobacterium sp. HMT-370 | ||
| Organism Name (as deposited) | HMT-370 Fusobacterium sp. HMT-370 F0437 | ||
| Strain or Isolate | F0437 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium sp000235465 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 308.3 | ||
| Contigs |
|
||
| Total Sequence Length | 2,093,299 (bp) | ||
| GC Percentage | 27.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/465/GCA_000235465.1_ASM23546v1 | ||
| CDS | 2141 | ||
| Genes | 2198 | ||
| mRNA | 2198 | ||
| misc RNA | 20 | ||
| rRNA | 2 | ||
| tRNA | 34 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 89.84 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM23546v1 |
| GenBank Assembly Accession | GCA_000235465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000235465.1 [NCBI] |
| BioSample | SAMN02299438 [NCBI] |
| BioProject | PRJNA50399 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2013-08-02T12:07:40.617 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGAD01 |
| NCBI TaxID | 861452 |
| Isolation Source | |
| Geo Location | not determined |
