Genome Meta Information: Streptococcus sp. HMT-058 F0407 (GCA_000235485.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000235485.1 | ||
| HOMD Taxon-ID | HMT-0058 | ||
| Species Name (in use by HOMD) | Streptococcus sp. HMT-058 | ||
| Organism Name (as deposited) | HMT-058 Streptococcus sp. HMT-058 F0407 | ||
| Strain or Isolate | F0407 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp000235485 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 81.1 | ||
| Contigs |
|
||
| Total Sequence Length | 1,848,904 (bp) | ||
| GC Percentage | 41.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/485/GCA_000235485.1_ASM23548v1 | ||
| CDS | 1791 | ||
| Genes | 1865 | ||
| mRNA | 1865 | ||
| misc RNA | 37 | ||
| rRNA | 3 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.94 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM23548v1 |
| GenBank Assembly Accession | GCA_000235485.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000235485.1 [NCBI] |
| BioSample | SAMN02299440 [NCBI] |
| BioProject | PRJNA50403 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2013-08-02T12:07:40.793 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGAE01 |
| NCBI TaxID | 861455 |
| Isolation Source | |
| Geo Location | not determined |
