Genome Meta Information: Cardiobacterium valvarum F0432 (GCA_000239355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000239355.1 | ||
| HOMD Taxon-ID | HMT-0540 | ||
| Species Name (in use by HOMD) | Cardiobacterium valvarum | ||
| Organism Name (as deposited) | HMT-540 Cardiobacterium valvarum F0432 | ||
| Strain or Isolate | F0432 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium; s__Cardiobacterium valvarum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 179.5 | ||
| Contigs |
|
||
| Total Sequence Length | 2,553,535 (bp) | ||
| GC Percentage | 58.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/355/GCA_000239355.1_ASM23935v1 | ||
| CDS | 2522 | ||
| Genes | 2586 | ||
| mRNA | 2586 | ||
| misc RNA | 14 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.67 % | ||
| CheckM Completeness | 94.3 % | ||
| CheckM Contamination | 0.9 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM23935v1 |
| GenBank Assembly Accession | GCA_000239355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000239355.1 [NCBI] |
| BioSample | SAMN02299434 [NCBI] |
| BioProject | PRJNA49689 [NCBI] |
| Submitter | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine |
| Submission Date | 2013-08-02T12:07:40.270 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGCM01 |
| NCBI TaxID | 797473 |
| Isolation Source | |
| Geo Location | not determined |
