Genome Meta Information: Actinomyces johnsonii F0330 (GCA_000239715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000239715.1 | ||
| HOMD Taxon-ID | HMT-849 | ||
| Species Name (in use by HOMD) | Actinomyces johnsonii | ||
| Organism Name (as deposited) | HMT-849 Actinomyces johnsonii F0330 | ||
| Strain or Isolate | F0330 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces johnsonii |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 21.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,459,374 (bp) | ||
| GC Percentage | 67.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/715/GCA_000239715.1_Actinomyces_sp_F0330_V1 | ||
| CDS | 2894 | ||
| Genes | 2971 | ||
| mRNA | 2971 | ||
| misc RNA | 16 | ||
| rRNA | 7 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 95.5 % | ||
| CheckM Contamination | 1.42 % | ||
| CheckM2 Completeness | 99.6 % | ||
| CheckM2 Contamination | 0.22 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Actinomyces_sp_F0330_V1 |
| GenBank Assembly Accession | GCA_000239715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000239715.1 [NCBI] |
| BioSample | SAMN02463764 [NCBI] |
| BioProject | PRJNA39355 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:36.990 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACTB01 |
| NCBI TaxID | 653386 |
| Isolation Source | missing |
| Geo Location | not determined |
