Genome Meta Information: Aggregatibacter actinomycetemcomitans ANH9381 (GCA_000241025.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000241025.2 | ||
| HOMD Taxon-ID | HMT-531 | ||
| Species Name (in use by HOMD) | Aggregatibacter actinomycetemcomitans | ||
| Organism Name (as deposited) | HMT-531 Aggregatibacter actinomycetemcomitans ANH9381 | ||
| Strain or Isolate | ANH9381 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter actinomycetemcomitans |
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| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
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| Total Sequence Length | 2,136,808 (bp) | ||
| GC Percentage | 44.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/025/GCA_000241025.2_ASM24102v2 | ||
| CDS | 2091 | ||
| Genes | 2220 | ||
| mRNA | 2220 | ||
| misc RNA | 58 | ||
| rRNA | 18 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.07 % | ||
| CheckM Completeness | 99.55 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.2 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM24102v2 |
| GenBank Assembly Accession | GCA_000241025.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000241025.1 [NCBI] |
| BioSample | SAMN02603044 [NCBI] |
| BioProject | PRJNA47337 [NCBI] |
| Submitter | Bumgarner laboratory, Department of Microbiology, University of Washington |
| Submission Date | 2014-01-30T11:19:27.923 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 754507 |
| Isolation Source | subgingival plaque sample of a peridontally non-diseased subject |
| Geo Location | |
