Genome Meta Information: Hallella dentalis DSM 3688 (GCA_000242335.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000242335.3 | ||
| HOMD Taxon-ID | HMT-0583 | ||
| Species Name (in use by HOMD) | Hallella dentalis | ||
| Organism Name (as deposited) | HMT-583 Hallella dentalis DSM 3688 | ||
| Strain or Isolate | DSM 3688 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella seregens |
||
| Sequencing Technology | 454/Illumina | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 3,350,206 (bp) | ||
| GC Percentage | 55.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/335/GCA_000242335.3_ASM24233v3 | ||
| CDS | 2640 | ||
| Genes | 2727 | ||
| mRNA | 2727 | ||
| misc RNA | 7 | ||
| rRNA | 15 | ||
| tRNA | 64 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 96.6 % | ||
| CheckM Contamination | 1.61 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM24233v3 |
| GenBank Assembly Accession | GCA_000242335.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000242335.1 [NCBI] |
| BioSample | SAMN02232045 [NCBI] |
| BioProject | PRJNA56077 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2013-07-12T10:59:50.710 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 908937 |
| Isolation Source | dental root canal |
| Geo Location | Missing |
