Genome Meta Information: Dolosigranulum pigrum ATCC 51524 (GCA_000245815.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000245815.1 | ||
| HOMD Taxon-ID | HMT-0813 | ||
| Species Name (in use by HOMD) | Dolosigranulum pigrum | ||
| Organism Name (as deposited) | HMT-813 Dolosigranulum pigrum ATCC 51524 | ||
| Strain or Isolate | ATCC 51524 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Dolosigranulum; s__Dolosigranulum pigrum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 1,862,135 (bp) | ||
| GC Percentage | 40.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/815/GCA_000245815.1_Dolo_pigr_ATCC_51524_V1 | ||
| CDS | 1684 | ||
| Genes | 1753 | ||
| mRNA | 1753 | ||
| misc RNA | 36 | ||
| rRNA | 9 | ||
| tRNA | 23 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.31 % | ||
| CheckM Contamination | 1.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Dolo_pigr_ATCC_51524_V1 |
| GenBank Assembly Accession | GCA_000245815.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000245815.1 [NCBI] |
| BioSample | SAMN02463904 [NCBI] |
| BioProject | PRJNA52171 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:53.793 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGEF01 |
| NCBI TaxID | 883103 |
| Isolation Source | |
| Geo Location | not determined |
