Genome Meta Information: Streptococcus oralis Uo5 (GCA_000253155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000253155.1 | ||
| HOMD Taxon-ID | HMT-0707 | ||
| Species Name (in use by HOMD) | Streptococcus oralis | ||
| Organism Name (as deposited) | HMT-707 Streptococcus oralis subsp. oralis Uo5 | ||
| Strain or Isolate | Uo5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus oralis_L |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,958,690 (bp) | ||
| GC Percentage | 41.14 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/155/GCA_000253155.1_ASM25315v1 | ||
| CDS | 1865 | ||
| Genes | 1980 | ||
| mRNA | 1980 | ||
| misc RNA | 41 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.37 % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM25315v1 |
| GenBank Assembly Accession | GCA_000253155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000253155.1 [NCBI] |
| BioSample | SAMEA2272261 [NCBI] |
| BioProject | PRJEA60241 [NCBI] |
| Submitter | Nano+Bio Center, University of Kaiserslautern |
| Submission Date | 2013-12-20T12:43:14.333 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 927666 |
| Isolation Source | |
| Geo Location | |
