Genome Meta Information: Streptococcus salivarius CCHSS3 (GCA_000253335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000253335.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius CCHSS3 | ||
| Strain or Isolate | CCHSS3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius_D |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,217,184 (bp) | ||
| GC Percentage | 39.87 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/335/GCA_000253335.1_ASM25333v1 | ||
| CDS | 2004 | ||
| Genes | 2135 | ||
| mRNA | 2135 | ||
| misc RNA | 44 | ||
| rRNA | 18 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.76 % | ||
| CheckM Completeness | 98.49 % | ||
| CheckM Contamination | 0.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM25333v1 |
| GenBank Assembly Accession | GCA_000253335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000253335.1 [NCBI] |
| BioSample | SAMEA2272545 [NCBI] |
| BioProject | PRJEA67173 [NCBI] |
| Submitter | Institut National de la Recherche Agronomique (INRA) |
| Submission Date | 2013-12-20T12:43:37.740 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1048332 |
| Isolation Source | |
| Geo Location | |
