Genome Meta Information: Kingella kingae PYKK081 (GCA_000255635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000255635.1 | ||
| HOMD Taxon-ID | HMT-0646 | ||
| Species Name (in use by HOMD) | Kingella kingae | ||
| Organism Name (as deposited) | HMT-646 Kingella kingae PYKK081 | ||
| Strain or Isolate | PYKK081 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Kingella; s__Kingella kingae |
||
| Sequencing Technology | 454; SOLiD | ||
| Genome Coverage | 84.6 | ||
| Contigs |
|
||
| Total Sequence Length | 2,097,547 (bp) | ||
| GC Percentage | 47.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/635/GCA_000255635.1_ASM25563v1 | ||
| CDS | 2088 | ||
| Genes | 2166 | ||
| mRNA | 2166 | ||
| misc RNA | 18 | ||
| rRNA | 9 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.5 % | ||
| CheckM Completeness | 98.33 % | ||
| CheckM Contamination | 0.91 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM25563v1 |
| GenBank Assembly Accession | GCA_000255635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000255635.1 [NCBI] |
| BioSample | SAMN02470276 [NCBI] |
| BioProject | PRJNA85111 [NCBI] |
| Submitter | Los Alamos National Laboratory |
| Submission Date | 2013-12-19T13:10:10.566 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AJGB01 |
| NCBI TaxID | 1150867 |
| Isolation Source | ankle joint of an 8 month old boy with septic arthritis |
| Geo Location | Israel |
