Genome Meta Information: Escherichia coli P12b (GCA_000257275.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000257275.1 | ||
| HOMD Taxon-ID | HMT-0574 | ||
| Species Name (in use by HOMD) | Escherichia coli | ||
| Organism Name (as deposited) | HMT-574 Escherichia coli P12b | ||
| Strain or Isolate | P12b | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia; s__Escherichia coli |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 4,935,294 (bp) | ||
| GC Percentage | 50.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/275/GCA_000257275.1_ASM25727v1 | ||
| CDS | 4811 | ||
| Genes | 5194 | ||
| mRNA | 5194 | ||
| misc RNA | 275 | ||
| rRNA | 22 | ||
| tRNA | 85 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.19 % | ||
| CheckM Completeness | 95.58 % | ||
| CheckM Contamination | 0.96 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM25727v1 |
| GenBank Assembly Accession | GCA_000257275.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000257275.1 [NCBI] |
| BioSample | SAMN02603904 [NCBI] |
| BioProject | PRJNA59455 [NCBI] |
| Submitter | TEDA School of Biological Sciences and Biotechnology, Nankai University |
| Submission Date | 2014-01-30T14:54:06.193 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 910348 |
| Isolation Source | |
| Geo Location | |
