Genome Meta Information: Haemophilus parainfluenzae HK262 (GCA_000259485.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000259485.1 | ||
| HOMD Taxon-ID | HMT-0718 | ||
| Species Name (in use by HOMD) | Haemophilus parainfluenzae | ||
| Organism Name (as deposited) | HMT-718 Haemophilus parainfluenzae HK262 | ||
| Strain or Isolate | HK262 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D parainfluenzae_AD |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 28 | ||
| Contigs |
|
||
| Total Sequence Length | 2,107,814 (bp) | ||
| GC Percentage | 39.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/485/GCA_000259485.1_HparainfluenzaeHK262v1.0 | ||
| CDS | 1977 | ||
| Genes | 2043 | ||
| mRNA | 2043 | ||
| misc RNA | 25 | ||
| rRNA | 3 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.4 % | ||
| CheckM Completeness | 99.58 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | HparainfluenzaeHK262v1.0 |
| GenBank Assembly Accession | GCA_000259485.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000259485.1 [NCBI] |
| BioSample | SAMN00761858 [NCBI] |
| BioProject | PRJNA75173 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-12-05T16:21:06.787 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AJMW01 |
| NCBI TaxID | 1095745 |
| Isolation Source | |
| Geo Location | not determined |
