Genome Meta Information: Haemophilus paraphrohaemolyticus HK411 (GCA_000260675.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000260675.1 | ||
| HOMD Taxon-ID | HMT-0035 | ||
| Species Name (in use by HOMD) | Haemophilus paraphrohaemolyticus | ||
| Organism Name (as deposited) | HMT-035 Haemophilus paraphrohaemolyticus HK411 | ||
| Strain or Isolate | HK411 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_A; s__Haemophilus_A paraphrohaemolyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 32.77 | ||
| Contigs |
|
||
| Total Sequence Length | 2,021,208 (bp) | ||
| GC Percentage | 40.83 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/675/GCA_000260675.1_HparaphrohaemolyticusHK411v1.0 | ||
| CDS | 1948 | ||
| Genes | 2020 | ||
| mRNA | 2020 | ||
| misc RNA | 25 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.05 % | ||
| CheckM Contamination | 0.11 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | HparaphrohaemolyticusHK411v1.0 |
| GenBank Assembly Accession | GCA_000260675.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000260675.1 [NCBI] |
| BioSample | SAMN00761819 [NCBI] |
| BioProject | PRJNA75147 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-12-05T15:11:06.280 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AJMU01 |
| NCBI TaxID | 1095743 |
| Isolation Source | |
| Geo Location | not determined |
