Genome Meta Information: Veillonella atypica ACP1 (GCA_000286635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000286635.1 | ||
| HOMD Taxon-ID | HMT-0524 | ||
| Species Name (in use by HOMD) | Veillonella atypica | ||
| Organism Name (as deposited) | HMT-524 Veillonella atypica ACP1 | ||
| Strain or Isolate | ACP1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella atypica |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 35 | ||
| Contigs |
|
||
| Total Sequence Length | 2,042,594 (bp) | ||
| GC Percentage | 38.83 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/635/GCA_000286635.1_VspACP1v1.0 | ||
| CDS | 1879 | ||
| Genes | 1952 | ||
| mRNA | 1952 | ||
| misc RNA | 20 | ||
| rRNA | 4 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | VspACP1v1.0 |
| GenBank Assembly Accession | GCA_000286635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000286635.1 [NCBI] |
| BioSample | SAMN00828793 [NCBI] |
| BioProject | PRJNA78581 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2012-03-15T11:53:01.770 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ALKL01 |
| NCBI TaxID | 936588 |
| Isolation Source | |
| Geo Location | not determined |
