Genome Meta Information: Fusobacterium hwasookii ChDC F128 (GCA_000292935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000292935.1 | ||
| HOMD Taxon-ID | HMT-0953 | ||
| Species Name (in use by HOMD) | Fusobacterium hwasookii | ||
| Organism Name (as deposited) | HMT-953 Fusobacterium hwasookii ChDC F128 | ||
| Strain or Isolate | ChDC F128 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium hwasookii |
||
| Sequencing Technology | 454 GS-FLX | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 2,361,684 (bp) | ||
| GC Percentage | 26.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/935/GCA_000292935.1_ASM29293v1 | ||
| CDS | 2210 | ||
| Genes | 2278 | ||
| mRNA | 2278 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.93 % | ||
| CheckM Completeness | 99.71 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM29293v1 |
| GenBank Assembly Accession | GCA_000292935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000292935.1 [NCBI] |
| BioSample | SAMN02469578 [NCBI] |
| BioProject | PRJNA171181 [NCBI] |
| Submitter | Chosun University |
| Submission Date | 2013-12-19T13:01:17.046 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ALVD01 |
| NCBI TaxID | 1216362 |
| Isolation Source | upper jaw tissue with sinusitis |
| Geo Location | South Korea |
