Genome Meta Information: Corynebacterium otitidis ATCC 51513 (GCA_000296405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000296405.1 | ||
| HOMD Taxon-ID | HMT-0832 | ||
| Species Name (in use by HOMD) | Corynebacterium otitidis | ||
| Organism Name (as deposited) | HMT-832 Corynebacterium otitidis ATCC 51513 | ||
| Strain or Isolate | ATCC 51513 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium otitidis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 214 | ||
| Contigs |
|
||
| Total Sequence Length | 2,118,285 (bp) | ||
| GC Percentage | 71.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/405/GCA_000296405.1_Turi_otit_ATCC_51513_V1 | ||
| CDS | 1795 | ||
| Genes | 1866 | ||
| mRNA | 1866 | ||
| misc RNA | 8 | ||
| rRNA | 4 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.93 % | ||
| CheckM Completeness | 96.24 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Turi_otit_ATCC_51513_V1 |
| GenBank Assembly Accession | GCA_000296405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000296405.1 [NCBI] |
| BioSample | SAMN02463914 [NCBI] |
| BioProject | PRJNA52203 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:55.093 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AHAE01 |
| NCBI TaxID | 883169 |
| Isolation Source | |
| Geo Location | not determined |
