Genome Meta Information: Streptococcus pneumoniae gamPNI0373 (GCA_000299015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000299015.1 | ||
| HOMD Taxon-ID | HMT-0734 | ||
| Species Name (in use by HOMD) | Streptococcus pneumoniae | ||
| Organism Name (as deposited) | HMT-734 Streptococcus pneumoniae gamPNI0373 | ||
| Strain or Isolate | gamPNI0373 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus pneumoniae |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,064,154 (bp) | ||
| GC Percentage | 39.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/015/GCA_000299015.1_ASM29901v1 | ||
| CDS | 2055 | ||
| Genes | 2199 | ||
| mRNA | 2199 | ||
| misc RNA | 74 | ||
| rRNA | 12 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.48 % | ||
| CheckM Completeness | 99.03 % | ||
| CheckM Contamination | 0.31 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM29901v1 |
| GenBank Assembly Accession | GCA_000299015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000299015.1 [NCBI] |
| BioSample | SAMN02299431 [NCBI] |
| BioProject | PRJNA42247 [NCBI] |
| Submitter | WashU |
| Submission Date | 2013-08-02T12:07:39.970 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 697283 |
| Isolation Source | |
| Geo Location | not determined |
