Genome Meta Information: Hoylesella saccharolytica F0055 (GCA_000318195.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000318195.2 | ||
| HOMD Taxon-ID | HMT-0781 | ||
| Species Name (in use by HOMD) | Hoylesella saccharolytica | ||
| Organism Name (as deposited) | HMT-781 Hoylesella saccharolytica F0055 | ||
| Strain or Isolate | F0055 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella saccharolytica |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 140 | ||
| Contigs |
|
||
| Total Sequence Length | 2,853,490 (bp) | ||
| GC Percentage | 43.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/195/GCA_000318195.2_ASM31819v2 | ||
| CDS | 2263 | ||
| Genes | 2318 | ||
| mRNA | 2318 | ||
| misc RNA | 5 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.97 % | ||
| CheckM Completeness | 99.18 % | ||
| CheckM Contamination | 0.11 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM31819v2 |
| GenBank Assembly Accession | GCA_000318195.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000318195.2 [NCBI] |
| BioSample | SAMN02436685 [NCBI] |
| BioProject | PRJNA80251 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:46.876 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AMEP01 |
| NCBI TaxID | 1127699 |
| Isolation Source | oral cavity |
| Geo Location | |
