Genome Meta Information: Streptococcus mutans AC4446 (GCA_000347855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000347855.1 | ||
| HOMD Taxon-ID | HMT-0686 | ||
| Species Name (in use by HOMD) | Streptococcus mutans | ||
| Organism Name (as deposited) | HMT-686 Streptococcus mutans AC4446 | ||
| Strain or Isolate | AC4446 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mutans |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,003,697 (bp) | ||
| GC Percentage | 36.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/855/GCA_000347855.1_AC4446_V1 | ||
| CDS | 1861 | ||
| Genes | 1968 | ||
| mRNA | 1968 | ||
| misc RNA | 26 | ||
| rRNA | 15 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.19 % | ||
| CheckM Completeness | 97.02 % | ||
| CheckM Contamination | 2.38 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | AC4446_V1 |
| GenBank Assembly Accession | GCA_000347855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000347855.1 [NCBI] |
| BioSample | SAMN02469957 [NCBI] |
| BioProject | PRJNA179255 [NCBI] |
| Submitter | Institute of Bioprocess and Biosystems Engineering |
| Submission Date | 2013-12-19T13:09:45.767 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AOCA01 |
| NCBI TaxID | 1257040 |
| Isolation Source | a confirmed case of infective endocarditis |
| Geo Location | Germany:Dillingen |
