Taxon Table | Genome Table
Genome Meta Information:
Streptococcus
sobrinus
DSM 20742 (GCA_000347935.1)
| HOMD Genome-ID |
GCA_000347935.1
|
| HOMD Taxon-ID |
HMT-0768
|
| Species Name (in use by HOMD) |
Streptococcus sobrinus
|
| Organism Name (as deposited) |
HMT-768 Streptococcus sobrinus DSM 20742
|
| Strain or Isolate |
DSM 20742
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus sobrinus |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
100
|
| Contigs |
Number of Contigs: 283
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,096,203 (bp) |
| GC Percentage |
43.46
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/935/GCA_000347935.1_DSM20742_V1
|
| CDS |
2099
|
| Genes |
2153
|
| mRNA |
2153
|
| misc RNA |
28
|
| rRNA |
4
|
| tRNA |
21
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.97 %
|
| CheckM Completeness |
87.85 %
|
| CheckM Contamination |
0.23 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
DSM20742_V1
|
| GenBank Assembly Accession |
GCA_000347935.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000347935.1
[NCBI]
|
| BioSample |
SAMN02469963
[NCBI]
|
| BioProject |
PRJNA179259
[NCBI]
|
| Submitter |
Institute of Bioprocess and Biosystems Engineering
|
| Submission Date |
2013-12-19T13:09:46.170
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
AOCE01
|
| NCBI TaxID |
1123317
|
| Isolation Source |
dental plaque
|
| Geo Location |
|
