Genome Meta Information: Atopobium minutum 10063974 (GCA_000364325.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000364325.1 | ||
| HOMD Taxon-ID | HMT-0674 | ||
| Species Name (in use by HOMD) | Atopobium minutum | ||
| Organism Name (as deposited) | HMT-674 Atopobium minutum 10063974 | ||
| Strain or Isolate | 10063974 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium; s__Atopobium minutum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 128 | ||
| Contigs |
|
||
| Total Sequence Length | 1,706,966 (bp) | ||
| GC Percentage | 48.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/325/GCA_000364325.1_Atop_minu_V1 | ||
| CDS | 1538 | ||
| Genes | 1601 | ||
| mRNA | 1601 | ||
| misc RNA | 10 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.77 % | ||
| CheckM Completeness | 99.1 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Atop_minu_V1 |
| GenBank Assembly Accession | GCA_000364325.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000364325.1 [NCBI] |
| BioSample | SAMN02596754 [NCBI] |
| BioProject | PRJNA64799 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:48:49.507 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGXC01 |
| NCBI TaxID | 997872 |
| Isolation Source | |
| Geo Location | |
