Genome Meta Information: Saccharimonas aalborgensis TM71 (GCA_000392435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000392435.1 | ||
| HOMD Taxon-ID | HMT-0988 | ||
| Species Name (in use by HOMD) | Saccharimonas aalborgensis | ||
| Organism Name (as deposited) | HMT-988 Saccharimonas aalborgensis TM71 | ||
| Strain or Isolate | TM71 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas; s__Saccharimonas aalborgensis |
||
| Sequencing Technology | Illumina HiSeq2000 | ||
| Genome Coverage | 890 | ||
| Contigs |
|
||
| Total Sequence Length | 1,013,781 (bp) | ||
| GC Percentage | 48.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/435/GCA_000392435.1_ASM39243v1 | ||
| CDS | 1048 | ||
| Genes | 1104 | ||
| mRNA | 1104 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 86.05 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM39243v1 |
| GenBank Assembly Accession | GCA_000392435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000392435.1 [NCBI] |
| BioSample | SAMN02602963 [NCBI] |
| BioProject | PRJNA201542 [NCBI] |
| Submitter | Aalborg University |
| Submission Date | 2014-01-30T11:19:20.240 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1332188 |
| Isolation Source | |
| Geo Location | |
