Genome Meta Information: Capnocytophaga granulosa ATCC 51502 (GCA_000411115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000411115.1 | ||
| HOMD Taxon-ID | HMT-0325 | ||
| Species Name (in use by HOMD) | Capnocytophaga granulosa | ||
| Organism Name (as deposited) | HMT-325 Capnocytophaga granulosa ATCC 51502 | ||
| Strain or Isolate | ATCC 51502 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga; s__Capnocytophaga granulosa |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 99 | ||
| Contigs |
|
||
| Total Sequence Length | 2,746,278 (bp) | ||
| GC Percentage | 41.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/115/GCA_000411115.1_Capn_gran_ATCC_51502_V1 | ||
| CDS | 2500 | ||
| Genes | 2560 | ||
| mRNA | 2560 | ||
| misc RNA | 10 | ||
| rRNA | 6 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.73 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Capn_gran_ATCC_51502_V1 |
| GenBank Assembly Accession | GCA_000411115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000411115.1 [NCBI] |
| BioSample | SAMN02595375 [NCBI] |
| BioProject | PRJNA41985 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-23T10:15:18.770 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ADDA01 |
| NCBI TaxID | 641143 |
| Isolation Source | |
| Geo Location | |
