Genome Meta Information: Cutibacterium avidum HGH0353 (GCA_000413335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000413335.1 | ||
| HOMD Taxon-ID | HMT-0552 | ||
| Species Name (in use by HOMD) | Cutibacterium avidum | ||
| Organism Name (as deposited) | HMT-552 Cutibacterium avidum HGH0353 | ||
| Strain or Isolate | HGH0353 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium avidum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 168 | ||
| Contigs |
|
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| Total Sequence Length | 2,741,290 (bp) | ||
| GC Percentage | 63.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/335/GCA_000413335.1_Prop_sp_HGH0353_V1 | ||
| CDS | 2504 | ||
| Genes | 2588 | ||
| mRNA | 2588 | ||
| misc RNA | 28 | ||
| rRNA | 5 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prop_sp_HGH0353_V1 |
| GenBank Assembly Accession | GCA_000413335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000413335.1 [NCBI] |
| BioSample | SAMN02596990 [NCBI] |
| BioProject | PRJNA169460 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:49:02.590 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ATFM01 |
| NCBI TaxID | 1203571 |
| Isolation Source | |
| Geo Location | |
