Genome Meta Information: Hoylesella oralis HGA0225 (GCA_000413355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000413355.1 | ||
| HOMD Taxon-ID | HMT-0705 | ||
| Species Name (in use by HOMD) | Hoylesella oralis | ||
| Organism Name (as deposited) | HMT-705 Hoylesella oralis HGA0225 | ||
| Strain or Isolate | HGA0225 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella phocaeensis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 279 | ||
| Contigs |
|
||
| Total Sequence Length | 2,857,367 (bp) | ||
| GC Percentage | 44.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/355/GCA_000413355.1_Prev_oral_HGA0225_V1 | ||
| CDS | 2348 | ||
| Genes | 2421 | ||
| mRNA | 2421 | ||
| misc RNA | 7 | ||
| rRNA | 9 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.87 % | ||
| CheckM Completeness | 99.33 % | ||
| CheckM Contamination | 0.34 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Prev_oral_HGA0225_V1 |
| GenBank Assembly Accession | GCA_000413355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000413355.1 [NCBI] |
| BioSample | SAMN02596991 [NCBI] |
| BioProject | PRJNA169459 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:49:02.633 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ATFN01 |
| NCBI TaxID | 1203550 |
| Isolation Source | |
| Geo Location | |
