Genome Meta Information: Alloscardovia omnicolens DSM 21503 (GCA_000420505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000420505.1 | ||
| HOMD Taxon-ID | HMT-198 | ||
| Species Name (in use by HOMD) | Alloscardovia omnicolens | ||
| Organism Name (as deposited) | HMT-198 Alloscardovia omnicolens DSM 21503 | ||
| Strain or Isolate | DSM 21503 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Alloscardovia; s__Alloscardovia omnicolens |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,847,146 (bp) | ||
| GC Percentage | 46.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/505/GCA_000420505.1_ASM42050v1 | ||
| CDS | 1554 | ||
| Genes | 1613 | ||
| mRNA | 1613 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 98.28 % | ||
| CheckM2 Contamination | 0.13 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM42050v1 |
| GenBank Assembly Accession | GCA_000420505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000420505.1 [NCBI] |
| BioSample | SAMN02441248 [NCBI] |
| BioProject | PRJNA185547 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2013-12-11T13:14:25.826 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ATVB01 |
| NCBI TaxID | 1120979 |
| Isolation Source | |
| Geo Location | Sweden |
