Genome Meta Information: Streptococcus intermedius B196 (GCA_000463355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000463355.1 | ||
| HOMD Taxon-ID | HMT-0644 | ||
| Species Name (in use by HOMD) | Streptococcus intermedius | ||
| Organism Name (as deposited) | HMT-644 Streptococcus intermedius B196 | ||
| Strain or Isolate | B196 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus intermedius |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 1,996,214 (bp) | ||
| GC Percentage | 37.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/355/GCA_000463355.1_ASM46335v1 | ||
| CDS | 1884 | ||
| Genes | 1994 | ||
| mRNA | 1994 | ||
| misc RNA | 36 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.37 % | ||
| CheckM Completeness | 95.17 % | ||
| CheckM Contamination | 2.89 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46335v1 |
| GenBank Assembly Accession | GCA_000463355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000463355.1 [NCBI] |
| BioSample | SAMN02603659 [NCBI] |
| BioProject | PRJNA50415 [NCBI] |
| Submitter | National Microbiology Laboratory, Public Health Agency of Canada |
| Submission Date | 2014-01-30T14:21:45.300 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 862967 |
| Isolation Source | |
| Geo Location | |
