Genome Meta Information: Cutibacterium granulosum TM11 (GCA_000464495.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000464495.1 | ||
| HOMD Taxon-ID | HMT-0114 | ||
| Species Name (in use by HOMD) | Cutibacterium granulosum | ||
| Organism Name (as deposited) | HMT-114 Cutibacterium granulosum TM11 | ||
| Strain or Isolate | TM11 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium granulosum |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 92 | ||
| Contigs |
|
||
| Total Sequence Length | 2,140,355 (bp) | ||
| GC Percentage | 64.16 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/495/GCA_000464495.1_TM11_assembly2012 | ||
| CDS | 1797 | ||
| Genes | 1866 | ||
| mRNA | 1866 | ||
| misc RNA | 18 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.88 % | ||
| CheckM Completeness | 93.02 % | ||
| CheckM Contamination | 1.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | TM11_assembly2012 |
| GenBank Assembly Accession | GCA_000464495.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000464495.1 [NCBI] |
| BioSample | SAMN02393704 [NCBI] |
| BioProject | PRJNA189037 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2013-11-05T14:39:45.776 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AOST01 |
| NCBI TaxID | 1292373 |
| Isolation Source | prostate, prostatectomy specimen |
| Geo Location | |
