Genome Meta Information: Selenomonas sp. HMT-892 F0426 (GCA_000468035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000468035.1 | ||
| HOMD Taxon-ID | HMT-0892 | ||
| Species Name (in use by HOMD) | Selenomonas sp. HMT-892 | ||
| Organism Name (as deposited) | HMT-892 Selenomonas sp. HMT-892 F0426 | ||
| Strain or Isolate | F0426 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda; s__Centipeda sp000468035 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 172 | ||
| Contigs |
|
||
| Total Sequence Length | 2,314,792 (bp) | ||
| GC Percentage | 55.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/035/GCA_000468035.1_ASM46803v1 | ||
| CDS | 2120 | ||
| Genes | 2199 | ||
| mRNA | 2199 | ||
| misc RNA | 23 | ||
| rRNA | 4 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.32 % | ||
| CheckM Contamination | 0.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46803v1 |
| GenBank Assembly Accession | GCA_000468035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000468035.1 [NCBI] |
| BioSample | SAMN02436726 [NCBI] |
| BioProject | PRJNA198895 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:49.250 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWVG01 |
| NCBI TaxID | 1321786 |
| Isolation Source | oral cavity- mouth |
| Geo Location | |
