Genome Meta Information: Hoylesella pleuritidis F0068 (GCA_000468135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000468135.1 | ||
| HOMD Taxon-ID | HMT-0303 | ||
| Species Name (in use by HOMD) | Hoylesella pleuritidis | ||
| Organism Name (as deposited) | HMT-303 Hoylesella pleuritidis F0068 | ||
| Strain or Isolate | F0068 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella pleuritidis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 56 | ||
| Contigs |
|
||
| Total Sequence Length | 2,709,958 (bp) | ||
| GC Percentage | 44.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/135/GCA_000468135.1_PpleuF0068v1.0 | ||
| CDS | 2307 | ||
| Genes | 2366 | ||
| mRNA | 2366 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.83 % | ||
| CheckM Completeness | 98.21 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PpleuF0068v1.0 |
| GenBank Assembly Accession | GCA_000468135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000468135.1 [NCBI] |
| BioSample | SAMN02436482 [NCBI] |
| BioProject | PRJNA72901 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2013-12-04T14:28:26.516 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AWET01 |
| NCBI TaxID | 1081904 |
| Isolation Source | |
| Geo Location | |
