Genome Meta Information: Bifidobacterium animalis ATCC 27673 (GCA_000471945.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000471945.1 | ||
| HOMD Taxon-ID | HMT-0895 | ||
| Species Name (in use by HOMD) | Bifidobacterium animalis | ||
| Organism Name (as deposited) | HMT-895 Bifidobacterium animalis ATCC 27673 | ||
| Strain or Isolate | ATCC 27673 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium; s__Bifidobacterium animalis |
||
| Sequencing Technology | 454 GS FLX | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 1,963,012 (bp) | ||
| GC Percentage | 60.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/945/GCA_000471945.1_ASM47194v1 | ||
| CDS | 1606 | ||
| Genes | 1681 | ||
| mRNA | 1681 | ||
| misc RNA | 9 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.53 % | ||
| CheckM Completeness | 95.55 % | ||
| CheckM Contamination | 1.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM47194v1 |
| GenBank Assembly Accession | GCA_000471945.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000471945.1 [NCBI] |
| BioSample | SAMN02603715 [NCBI] |
| BioProject | PRJNA133057 [NCBI] |
| Submitter | Penn State |
| Submission Date | 2014-01-30T14:21:48.206 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1167629 |
| Isolation Source | |
| Geo Location | |
