Genome Meta Information: Streptococcus anginosus SK52 (GCA_000474055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000474055.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus SK52 | ||
| Strain or Isolate | SK52 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Roche 454 | ||
| Genome Coverage | 35 | ||
| Contigs |
|
||
| Total Sequence Length | 1,900,641 (bp) | ||
| GC Percentage | 38.64 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/055/GCA_000474055.1_ASM47405v1 | ||
| CDS | 1841 | ||
| Genes | 1944 | ||
| mRNA | 1944 | ||
| misc RNA | 52 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.03 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM47405v1 |
| GenBank Assembly Accession | GCA_000474055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000474055.1 [NCBI] |
| BioSample | SAMD00036758 [NCBI] |
| BioProject | PRJDB75 [NCBI] |
| Submitter | Pediatric Dentistry, Tokyo Dental College |
| Submission Date | 2015-09-16T16:10:39.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BAST01 |
| NCBI TaxID | 1000570 |
| Isolation Source | |
| Geo Location | |
