Genome Meta Information: Streptococcus anginosus T5 (GCA_000474155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000474155.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus T5 | ||
| Strain or Isolate | T5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Roche 454 | ||
| Genome Coverage | 35 | ||
| Contigs |
|
||
| Total Sequence Length | 1,789,216 (bp) | ||
| GC Percentage | 39.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/155/GCA_000474155.1_ASM47415v1 | ||
| CDS | 1705 | ||
| Genes | 1796 | ||
| mRNA | 1796 | ||
| misc RNA | 41 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.1 % | ||
| CheckM Completeness | 97.84 % | ||
| CheckM Contamination | 1.71 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM47415v1 |
| GenBank Assembly Accession | GCA_000474155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000474155.1 [NCBI] |
| BioSample | SAMD00036763 [NCBI] |
| BioProject | PRJDB80 [NCBI] |
| Submitter | Pediatric Dentistry, Tokyo Dental College |
| Submission Date | 2015-09-16T16:10:41.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BASY01 |
| NCBI TaxID | 1163302 |
| Isolation Source | |
| Geo Location | |
