Genome Meta Information: Streptococcus anginosus MAS624 (GCA_000478925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000478925.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus MAS624 | ||
| Strain or Isolate | MAS624 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus whileyi |
||
| Sequencing Technology | Roche 454; Illumina; Sanger | ||
| Genome Coverage | 80 | ||
| Contigs |
|
||
| Total Sequence Length | 2,122,284 (bp) | ||
| GC Percentage | 38.34 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/925/GCA_000478925.1_ASM47892v1 | ||
| CDS | 2108 | ||
| Genes | 2232 | ||
| mRNA | 2232 | ||
| misc RNA | 43 | ||
| rRNA | 15 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.35 % | ||
| CheckM Completeness | 94.87 % | ||
| CheckM Contamination | 0.72 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM47892v1 |
| GenBank Assembly Accession | GCA_000478925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000478925.1 [NCBI] |
| BioSample | SAMD00061060 [NCBI] |
| BioProject | PRJDB81 [NCBI] |
| Submitter | Pediatric Dentistry, Tokyo Dental College |
| Submission Date | 2016-09-28T01:02:14.918 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1353243 |
| Isolation Source | |
| Geo Location | |
