Genome Meta Information: Fusobacterium polymorphum CTI-6 (GCA_000479185.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000479185.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum CTI-6 | ||
| Strain or Isolate | CTI-6 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 146 | ||
| Contigs |
|
||
| Total Sequence Length | 2,447,188 (bp) | ||
| GC Percentage | 26.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/185/GCA_000479185.1_Fuso_nucl_CTI-6_V1 | ||
| CDS | 2383 | ||
| Genes | 2441 | ||
| mRNA | 2441 | ||
| misc RNA | 24 | ||
| rRNA | 2 | ||
| tRNA | 31 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.37 % | ||
| CheckM Completeness | 97.94 % | ||
| CheckM Contamination | 0.5 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_nucl_CTI-6_V1 |
| GenBank Assembly Accession | GCA_000479185.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000479185.1 [NCBI] |
| BioSample | SAMN02597022 [NCBI] |
| BioProject | PRJNA197117 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:49:04.087 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AXNV01 |
| NCBI TaxID | 1316587 |
| Isolation Source | |
| Geo Location | |
