Genome Meta Information: Fusobacterium nucleatum_sensu_stricto CTI-2 (GCA_000479265.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000479265.1 | ||
| HOMD Taxon-ID | HMT-0698 | ||
| Species Name (in use by HOMD) | Fusobacterium nucleatum_sensu_stricto | ||
| Organism Name (as deposited) | HMT-698 Fusobacterium nucleatum_sensu_stricto CTI-2 | ||
| Strain or Isolate | CTI-2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium nucleatum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 36 | ||
| Contigs |
|
||
| Total Sequence Length | 2,284,954 (bp) | ||
| GC Percentage | 28.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/265/GCA_000479265.1_Fuso_nucl_CTI-2_V1 | ||
| CDS | 2088 | ||
| Genes | 2166 | ||
| mRNA | 2166 | ||
| misc RNA | 18 | ||
| rRNA | 10 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.87 % | ||
| CheckM Completeness | 98.49 % | ||
| CheckM Contamination | 0.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_nucl_CTI-2_V1 |
| GenBank Assembly Accession | GCA_000479265.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000479265.1 [NCBI] |
| BioSample | SAMN02597025 [NCBI] |
| BioProject | PRJNA170357 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2014-01-27T09:49:04.217 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AXNY01 |
| NCBI TaxID | 1204475 |
| Isolation Source | |
| Geo Location | |
