Genome Meta Information: Streptococcus ilei na (GCA_000479315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000479315.1 | ||
| HOMD Taxon-ID | HMT-0456 | ||
| Species Name (in use by HOMD) | Streptococcus ilei | ||
| Organism Name (as deposited) | HMT-456 Streptococcus koreensis na | ||
| Strain or Isolate | na | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus ilei |
||
| Sequencing Technology | ABI 3730; 454 GS FLX Titanium plus; Illumina Hiseq 2000 | ||
| Genome Coverage | 1000 | ||
| Contigs |
|
||
| Total Sequence Length | 2,023,580 (bp) | ||
| GC Percentage | 42.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/315/GCA_000479315.1_ASM47931v1 | ||
| CDS | 1875 | ||
| Genes | 2010 | ||
| mRNA | 0 | ||
| misc RNA | 37 | ||
| rRNA | 13 | ||
| tRNA | 84 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97 % | ||
| CheckM Completeness | 99.32 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM47931v1 |
| GenBank Assembly Accession | GCA_000479315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000479315.1 [NCBI] |
| BioSample | SAMN02343234 [NCBI] |
| BioProject | PRJNA214028 [NCBI] |
| Submitter | Kyung Hee University |
| Submission Date | 2013-09-03T03:28:04.046 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1156431 |
| Isolation Source | |
| Geo Location | |
