Genome Meta Information: Eikenella corrodens CC92I (GCA_000504685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000504685.1 | ||
| HOMD Taxon-ID | HMT-0577 | ||
| Species Name (in use by HOMD) | Eikenella corrodens | ||
| Organism Name (as deposited) | HMT-577 Eikenella corrodens CC92I | ||
| Strain or Isolate | CC92I | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Eikenella; s__Eikenella corrodens |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 267 | ||
| Contigs |
|
||
| Total Sequence Length | 2,214,907 (bp) | ||
| GC Percentage | 55.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/685/GCA_000504685.1_Eike_corr_CC92I_V1 | ||
| CDS | 2082 | ||
| Genes | 2161 | ||
| mRNA | 2161 | ||
| misc RNA | 13 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.64 % | ||
| CheckM Completeness | 96.19 % | ||
| CheckM Contamination | 0.45 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Eike_corr_CC92I_V1 |
| GenBank Assembly Accession | GCA_000504685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000504685.1 [NCBI] |
| BioSample | SAMN00103446 [NCBI] |
| BioProject | PRJNA71555 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2011-03-29T23:52:10.170 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AZGQ01 |
| NCBI TaxID | 1073362 |
| Isolation Source | missing |
| Geo Location | missing |
