Genome Meta Information: Bacteroides pyogenes JCM 6294 (GCA_000511755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000511755.1 | ||
| HOMD Taxon-ID | HMT-787 | ||
| Species Name (in use by HOMD) | Bacteroides pyogenes | ||
| Organism Name (as deposited) | HMT-787 Bacteroides pyogenes JCM 6294 | ||
| Strain or Isolate | JCM 6294 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides pyogenes |
||
| Sequencing Technology | Ion PGM | ||
| Genome Coverage | 32.9x | ||
| Contigs |
|
||
| Total Sequence Length | 3,404,843 (bp) | ||
| GC Percentage | 45.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/755/GCA_000511755.1_ASM51175v1 | ||
| CDS | 3323 | ||
| Genes | 3417 | ||
| mRNA | 3417 | ||
| misc RNA | 29 | ||
| rRNA | 3 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 97.24 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 92.12 % | ||
| CheckM2 Contamination | 1.72 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM51175v1 |
| GenBank Assembly Accession | GCA_000511755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000511755.1 [NCBI] |
| BioSample | SAMD00016376 [NCBI] |
| BioProject | PRJDB557 [NCBI] |
| Submitter | The University of Tokyo |
| Submission Date | 2014-03-26T08:16:35.373 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BAIR01 |
| NCBI TaxID | 1121100 |
| Isolation Source | |
| Geo Location | |
