Genome Meta Information: Veillonella denticariosi AS16 (GCA_000517785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000517785.1 | ||
| HOMD Taxon-ID | HMT-0887 | ||
| Species Name (in use by HOMD) | Veillonella denticariosi | ||
| Organism Name (as deposited) | HMT-887 Veillonella denticariosi AS16 | ||
| Strain or Isolate | AS16 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella denticariosi |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 85 | ||
| Contigs |
|
||
| Total Sequence Length | 1,946,140 (bp) | ||
| GC Percentage | 43.14 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/785/GCA_000517785.1_VspAS16v1.0 | ||
| CDS | 1747 | ||
| Genes | 1800 | ||
| mRNA | 1800 | ||
| misc RNA | 18 | ||
| rRNA | 2 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | VspAS16v1.0 |
| GenBank Assembly Accession | GCA_000517785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000517785.1 [NCBI] |
| BioSample | SAMN02597445 [NCBI] |
| BioProject | PRJNA165949 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-01-27T12:59:08.067 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AZYX01 |
| NCBI TaxID | 936589 |
| Isolation Source | |
| Geo Location | |
