Genome Meta Information: Fusobacterium polymorphum 13_3C (GCA_000523555.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000523555.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum 13_3C | ||
| Strain or Isolate | 13_3C | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 142 | ||
| Contigs |
|
||
| Total Sequence Length | 2,631,404 (bp) | ||
| GC Percentage | 28.64 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/555/GCA_000523555.1_Fuso_nucl_13_3C_V1 | ||
| CDS | 2432 | ||
| Genes | 2519 | ||
| mRNA | 2519 | ||
| misc RNA | 23 | ||
| rRNA | 16 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.31 % | ||
| CheckM Completeness | 99.55 % | ||
| CheckM Contamination | 0.85 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fuso_nucl_13_3C_V1 |
| GenBank Assembly Accession | GCA_000523555.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000523555.1 [NCBI] |
| BioSample | SAMN00690715 [NCBI] |
| BioProject | PRJNA212676 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2011-08-06T12:47:08.890 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAOZ01 |
| NCBI TaxID | 1357398 |
| Isolation Source | missing |
| Geo Location | missing |
