Genome Meta Information: Veillonella atypica ICM51a (GCA_000524355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000524355.1 | ||
| HOMD Taxon-ID | HMT-0524 | ||
| Species Name (in use by HOMD) | Veillonella atypica | ||
| Organism Name (as deposited) | HMT-524 Veillonella atypica ICM51a | ||
| Strain or Isolate | ICM51a | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella atypica |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 85 | ||
| Contigs |
|
||
| Total Sequence Length | 2,157,029 (bp) | ||
| GC Percentage | 38.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/355/GCA_000524355.1_VspICM51av1.0 | ||
| CDS | 1995 | ||
| Genes | 2059 | ||
| mRNA | 2059 | ||
| misc RNA | 19 | ||
| rRNA | 4 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.63 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | VspICM51av1.0 |
| GenBank Assembly Accession | GCA_000524355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000524355.1 [NCBI] |
| BioSample | SAMN02641570 [NCBI] |
| BioProject | PRJNA165917 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-02-13T12:40:45.730 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAPX01 |
| NCBI TaxID | 936591 |
| Isolation Source | missing |
| Geo Location | missing |
