Genome Meta Information: Fusobacterium polymorphum CM22 (GCA_000524395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000524395.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum CM22 | ||
| Strain or Isolate | CM22 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 85 | ||
| Contigs |
|
||
| Total Sequence Length | 2,438,137 (bp) | ||
| GC Percentage | 26.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/395/GCA_000524395.1_FspCM22v1.0 | ||
| CDS | 2361 | ||
| Genes | 2430 | ||
| mRNA | 2430 | ||
| misc RNA | 29 | ||
| rRNA | 3 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.81 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | FspCM22v1.0 |
| GenBank Assembly Accession | GCA_000524395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000524395.1 [NCBI] |
| BioSample | SAMN02641566 [NCBI] |
| BioProject | PRJNA165909 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2014-02-13T12:40:45.440 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQC01 |
| NCBI TaxID | 936563 |
| Isolation Source | missing |
| Geo Location | missing |
