Genome Meta Information: Stutzerimonas stutzeri 28a24 (GCA_000590475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000590475.1 | ||
| HOMD Taxon-ID | HMT-0477 | ||
| Species Name (in use by HOMD) | Stutzerimonas stutzeri | ||
| Organism Name (as deposited) | HMT-477 Stutzerimonas stutzeri 28a24 | ||
| Strain or Isolate | 28a24 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Stutzerimonas; s__Stutzerimonas stutzeri_D |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 4,731,359 (bp) | ||
| GC Percentage | 60.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/475/GCA_000590475.1_ASM59047v1 | ||
| CDS | 4297 | ||
| Genes | 4416 | ||
| mRNA | 4416 | ||
| misc RNA | 46 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 82.45 % | ||
| CheckM Completeness | 96.82 % | ||
| CheckM Contamination | 0.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM59047v1 |
| GenBank Assembly Accession | GCA_000590475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000590475.1 [NCBI] |
| BioSample | SAMN02673421 [NCBI] |
| BioProject | PRJNA240232 [NCBI] |
| Submitter | University of Arizona |
| Submission Date | 2014-03-05T14:57:28.196 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 316 |
| Isolation Source | soil |
| Geo Location | Israel |
