Genome Meta Information: Fusobacterium necrophorum B35 (GCA_000600355.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000600355.1 | ||
| HOMD Taxon-ID | HMT-0690 | ||
| Species Name (in use by HOMD) | Fusobacterium necrophorum | ||
| Organism Name (as deposited) | HMT-690 Fusobacterium necrophorum B35 | ||
| Strain or Isolate | B35 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C; s__Fusobacterium_C necrophorum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 59 | ||
| Contigs |
|
||
| Total Sequence Length | 2,088,497 (bp) | ||
| GC Percentage | 34.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/355/GCA_000600355.1_FNF_B35 | ||
| CDS | 1898 | ||
| Genes | 1974 | ||
| mRNA | 1974 | ||
| misc RNA | 18 | ||
| rRNA | 9 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.96 % | ||
| CheckM Completeness | 94.24 % | ||
| CheckM Contamination | 4.38 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | FNF_B35 |
| GenBank Assembly Accession | GCA_000600355.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000600355.1 [NCBI] |
| BioSample | SAMN02700144 [NCBI] |
| BioProject | PRJNA186622 [NCBI] |
| Submitter | University of Missouri-Columbia |
| Submission Date | 2014-03-25T16:52:16.240 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AOJP01 |
| NCBI TaxID | 1226633 |
| Isolation Source | bovine liver abscess |
| Geo Location | USA: Kansas |
