Taxon Table | Genome Table
Genome Meta Information:
Lacticaseibacillus
casei
JCM 1134 (GCA_000615205.1)
| HOMD Genome-ID |
GCA_000615205.1
|
| HOMD Taxon-ID |
HMT-0568
|
| Species Name (in use by HOMD) |
Lacticaseibacillus casei
|
| Organism Name (as deposited) |
HMT-568 Lacticaseibacillus casei JCM 1134
|
| Strain or Isolate |
JCM 1134
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lacticaseibacillus;
s__Lacticaseibacillus casei |
| Sequencing Technology |
|
| Genome Coverage |
|
| Contigs |
Number of Contigs: 178
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,780,019 (bp) |
| GC Percentage |
47.75
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/205/GCA_000615205.1_ASM61520v1
|
| CDS |
3004
|
| Genes |
3083
|
| mRNA |
3083
|
| misc RNA |
29
|
| rRNA |
2
|
| tRNA |
47
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
|
| GenBank Assembly Accession |
GCA_000615205.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
[NCBI]
|
| BioProject |
[NCBI]
|
| Submitter |
|
| Submission Date |
|
| Assembly Method |
|
| Assembly Level |
|
| Sequencing Status |
|
| WGS
Project |
|
| NCBI TaxID |
|
| Isolation Source |
|
| Geo Location |
|
